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To make a new version of the flow msi you need two Guids. One for the product (upgradecode) and one for the folder in the start menu.
Create your GUIDS here: http://www.guidgenerator.com/online-guid-generator.aspx^{Image Removed}

1 Change the msi name in the properties of the wix project (WaterFlowModel1D.wixProj)OutputName tag in the wixProj file. Keep the suffix of buildnumber as it adds a buildnumber to the msi name.

Changes in the Product.wxs:
2 Change the <?define ProductVersionReleaseVersion="1.0.0.1" ?> element and <ProductName> in the Product.wxs
3 Change the GUID for the UpgradeCode in the <Product> element.
4 Use the same GUID as in 3 for the <Upgrade> elementID
5 Change the GUID of the ProgramMenuDir" component.Like this <Component Id="ProgramMenuDir" Guid="CHANGE-THIS-GUID">

Note that the assembly version of DeltaShell.Gui should also be changed to allow real side-by-side (no setting sharing). When the MSI is build by teamcity this works automatically because teamcity includes the svn revision in the version.

The name of the artifact in the MSI and ZIP configuration should also change